Publications

Link to Google Scholar Profile

  1. Christie, S. M.; Hao, J.; Tracy, E.; Buck, M.; Yu, J. S.; Smith, A. W. (2021) Interactions between semaphorins and plexin–neuropilin receptor complexes in the membranes of live cells. J. Biol. Chem., 297, 100965.
  2. Du, Z.; Brown, B. P.; Kim, S.; Ferguson, D.; Pavlick, D. C.; Jayakumaran, G.; Benayed, R.; Gallant, J. N.; Zhang, Y.K.; Yan, Y.; Red-Brewer, M.; Ali, S. M.; Schrock, A. B.; Zehir, A.; Ladanyi, M.; Smith, A. W.; Meiler, J.; Lovely, C. M. (2021) Structure-function analysis of oncogenic EGFR Kinase Domain Duplication reveals insights into activation and a potential approach for therapeutic targeting. Nature Comm. 12, 1382.
  3. Asher, W. B.; Geggier, P.; Holsey, M. D.; Gilmore, G. T.; Pati, A.; Meszaros, J.; Terry, D. S.; Mathiasen, S.; Kaliszewski, M. J.; McCauley, M. D.; Govindaraju, A.; Zhou, Z.; Harikumar, K. G. Jaqaman, K.; Miller, L. J.; Smith, A. W.; Blanchard, S. C.; Javitch, J. A. (2021) Single-Molecule FRET Imaging of GPCR Dimers in Living Cells. Nature Methods 18, 397-405.
  4. Christie, S. M.; Ham, T. R.; Gilmore, G. T.; Toth, P. D.; Leipzig, N. D.; Smith, A. W. (2020) Covalently Immobilizing Interferon-γ Drives Filopodia Production through Specific Receptor–Ligand Interactions Independently of Canonical Downstream Signaling. Bioconjugate Chem. 31, 1362-1369.
  5. Christie, S.; Shi, X.; Smith, A. W. (2020) Resolving Membrane Protein–Protein Interactions in Live Cells with Pulsed Interleaved Excitation Fluorescence Cross-Correlation Spectroscopy. Accounts of Chemical Research 53, 792-799.
  6. Ge, Y.; Shi, X.; Boopathy, S.; McDonald, J.; Smith, A. W.; Chao, L. H. (2020) Two forms of Opa1 cooperate to complete fusion of the mitochondrial inner-membrane. eLife, 9, e50973.
  7. Agarwal, G.; Smith, A. W.; Jones, B. (2019) Discoidin domain receptors: Micro insights into macro assemblies. BBA – Molecular and Cellular Research, 1866, 118496.
  8. Li, X., Smith, A. W. (2019) Quantifying Lipid Mobility and Peptide Binding for Gram-Negative and Gram-Positive Model Supported Lipid Bilayers. Journal of Physical Chemistry B, 123, 10433-10440.
  9. Bogucki, R., M. Greggila, P. Mallory, J. Feng, K. Siman, B. Khakipoor, H. King and Smith, A. W. (2019). A 3D-Printable Dual Beam Spectrophotometer with Multiplatform Smartphone Adaptor. Journal of Chemical Education, 96, 1527-1531.
  10. Li, X., Shi, X., Kaliszewski, M.J., and Smith, A.W. (2019) Chapter Three – Fluorescence cross-correlation spectroscopy of lipid-peptide interactions on supported lipid bilayers. Advances in Biomembranes and Lipid Self-Assembly, 29, 49-68.
  11. Alves, D. S., Westerfield, J. M., Shi, X., Nguyen, V. P., Stefanski, K. M., Booth, K. R., Kim, S., Morrell-Falvey, J., Wang, B.-C., Abel, S. M., Smith, A. W., Barrera, F. N. (2018) A novel pH-dependent membrane peptide that binds to EphA2 and inhibits cell migration. eLife 7, e36645.
  12. Mallory, P., Gutierrez, E., Pinkevitch, M., Klinginsmith, C., Comar, W. D., Roushar, F. J., Schlebach, J. P., Smith, A. W. and Jastrzebska, B. (2018) The Retinitis Pigmentosa-Linked Mutations in Transmembrane Helix 5 of Rhodopsin Disrupt Cellular Trafficking Regardless of Oligomerization State. Biochemistry 57, 5188-5201.
  13. Kaliszewski, M. J., Shi, X., Hou, Y., Lingerak, R., Kim, S., Mallory, P., Smith, A. W. (2018) Quantifying Membrane Protein Oligomerization with Fluorescence Cross-Correlation Spectroscopy, Methods 140-141, 40-51.
  14. Zeng, Z., Shi, X., Mabe, T., Christie, S., Gilmore, G., Smith, A. W., and Wei, J. (2017) Protein Trapping in Plasmonic Nanoslit and Nanoledge Cavities: The Behavior and Sensing, Analytical Chemistry 89, 5221-5229.
  15. Shi, X., Hapiak, V., Zheng, J., Muller-Greven, J., Bowman, D., Lingerak, R., Buck, M., Wang, B.-C., and Smith, A. W. (2017) A role of the SAM domain in EphA2 receptor activation, Scientific Reports 7, 45084.
  16. Jastrzebska, B., Comar, W. D., Kaliszewski, M. J., Skinner, K. C., Torcasio, M. H., Esway, A. S., Jin, H., Palczewski, K., and Smith, A. W. (2017) A GPCR dimerization interface in human cone opsins, Biochemistry, 56, 61–72.
  17. Huang, Y., Bharill, S., Karandur, D., Peterson, S. M., Marita, M., Shi, X., Kaliszewski, M. J., Smith, A. W.*, Isacoff, E. Y.*, Kuriyan, J.*, (2016) Molecular Basis for Multimerization in the Activation of the Epidermal Growth Factor Receptor. eLife, 5, e14107. *Joint corresponding authors
  18. Smith, A. W., Huang, H. H., Endres, N. F., Rhodes, C., Groves, J. T. (2016) Dynamic Organization of Myristoylated Src in the Live Cell Plasma Membrane. J. Phys. Chem. B, 120, 867-876.
  19. Shi, X., Kohram, M., Zhuang, X., Smith, A. W. (2016) Interactions and translational dynamics of phosphatidylinositol bisphosphate (PIP2) lipids in asymmetric lipid bilayers. Langmuir 32, 1732-1741.
  20. Liu, C.; Wang, K.; Yi, C.; Shi, X.; Smith, A. W.; Gong, X.; Heeger, A. J. (2016) Efficient Perovskite Hybrid Photovoltaics Via Alcohol-Vapor Annealing Treatment. Adv. Funct. Mater. 25, 101-110.
  21. Grasse, E. K.; Torcasio, M. H.; Smith, A. W. (2016) Teaching UV–Vis Spectroscopy with a 3D-Printable Smartphone Spectrophotometer. J. Chem. Edu. 93, 146-151.
  22. Marita, M., Wang, Y, Comar, W. D., Shi, X., Dasari, P., Zhang, X., and Smith, A. W. (2015) Class A plexins are organized as preformed inactive dimers on the cell surface. Biophysical Journal 109, 1937-1945.
  23. Biswas, K. H.; Hartman, K. L.; Yu, C.-h.; Harrison, O. J.; Song, H.; Smith, A. W.; Huang, W. Y. C.; Lin, W.-C.; Guo, Z.; Padmanabhan, A.; Troyanovsky, S. M.; Dustin, M. L.; Shapiro, L.; Honig, B.; Zaidel-Bar, R.; Groves, J. T., (2015) E-cadherin junction formation involves an active kinetic nucleation process. Proc. Natl. Acad. Sci. U.S.A. 112, 10932-10937.
  24. Liu, C., Wang, K., Yi, C., Shi, X., Du, P., Smith, A. W., Karim, A., Gong, X. (2015) Ultrasensitive Solution-Processed Perovskite Hybrid Photodetectors. J. Mat. Chem. C 3, 6600-6606.
  25. Smith, A. W. (2015) Detection of Rhodopsin Dimerization In Situ by PIE-FCCS, a Time-Resolved Fluorescence Spectroscopy. Methods in Molecular Biology, Rhodopsin. 1271, 205-219.
  26. Shi, X., Li, X., Kaliszewski, M. J., Zhuang, X., and Smith, A. W. (2015) Tuning the Mobility Coupling of Quaternized Polyvinylpyridine and Anionic Phospholipids in Supported Lipid Bilayers. Langmuir 31, 1784-1791.
  27. Comar, W. D., Schubert, S. M., Jastrzebska, B., Palczewski, K. and Smith, A. W. (2014) Mobility and clustering of the opsin G protein-coupled receptor in live cells with time-resolved fluorescence spectroscopy. Journal of the American Chemical Society 136, 8342.
In the Groves Lab
  1. Endres, N. F.*, Das, R.*, Smith, A. W.*, Arkhipov, A., Kovacs, E., Huang, Y., Pelton, J.G., Shan, Y., Shaw, D.E., Wemmer, D.E., Groves, J.T., Kuriyan, J.(2013) Conformational Coupling across the Plasma Membrane in Activation of the EGF Receptor. Cell 152, 543-546. *Equal Contribution
  2. Smoligovets, A. A., Smith, A. W., and Groves, J. T. (2013) Ratiometric Imaging of the T-Cell Actin Cytoskeleton Reveals the Nature of Receptor-Induced Cytoskeletal Enrichment. Biophysical Journal 105, L11-L13.
  3. Triffo, S. B., Huang, H. H., Smith, A. W., Chou, E. T., Groves, J. T.(2012).  Monitoring Lipid Anchor Organization in Cell Membranes by PIE-FCCS.  Journal of the American Chemical Society 134, 10833–10842.
  4. Belardi, B., O’Donoghue, G. P., Smith, A. W., Groves, J. T., Bertozzi, C. R.  (2012). Investigating Cell Surface Galectin-Mediated Cross-Linking on Glycoengineered Cells. Journal of the American Chemical Society 134, 9549.
  5. Smith, A. W. (2012).  Lipid-protein interactions in biological membranes: a dynamic perspective.  Biochimica et Biophysica Acta – Biomembranes 1818, 172.
  6. Smoligovets, A. A., Smith, A. W., Wu, H. J., and Groves, J. T. (2012).  Characterization of dynamic actin associations with T-cell receptor microclusters in primary T cells. Journal of Cell Science 125, 725.
  7. Smith, A. W., Smoligovets, A. A., and Groves, J. T. (2011). Patterned two-photon photoactivation illuminates spatial reorganization in live cells.  Journal of Physical Chemistry A, 115, 3867-3875.
In the Tokmakoff Lab
  1. Smith, A. W., Lessing, J., Ganim, Z., Peng, C. S., Roy, S., Jansen, T. L. C., Knoester, J., and Tokmakoff, A. (2010).  Feature Article: Melting of a beta-hairpin peptide using isotope-edited 2D IR spectroscopy and simulations.  Journal of Physical Chemistry B. 114, 10913.
  2. Ganim, Z. Chung. H. S., Smith, A. W., DeFlores, L. P., Jones, K. C. and Tokmakoff, A. (2008). Amide I two-dimensional infrared spectroscopy of proteins. Accounts of Chemical Research 41, 432-441.
  3. Smith, A. W., and Tokmakoff, A. (2007). Probing local structural events in beta-hairpin unfolding with transient nonlinear infrared spectroscopy. Angewandte Chemie International Edition 46, 7984-7987.
  4. Chung, H. S., Khalil, M., Smith, A. W. and Tokmakoff, A. (2007). Transient 2D IR spectrometer for probing nanosecond temperature-jump kinetics.  Review of Scientific Instruments 78, 063101.
  5. Smith, A. W., and Tokmakoff, A. (2007). Amide I two-dimensional infrared spectroscopy of beta-hairpin peptides. Journal of Chemical Physics 126, 045109.
  6. Smith, A. W., Chung, H. S., Ganim, Z., and Tokmakoff, A. (2006) Multidimensional IR Spectroscopy of Site-Specific Hairpin Folding. Proceedings of the 15th International Conference on Ultrafast Phenomena, Pacific Grove, CA.
  7. Smith, A. W., Chung, H. S., Ganim, Z., and Tokmakoff, A. (2005) Residual native structure in a thermally denatured beta-hairpin. Journal of Physical Chemistry B 109, 17025-17027.
  8. Chung, H. S., Khalil, M., Smith, A. W., Ganim, Z., and Tokmakoff, A. (2005) Conformational changes during the nanosecond-to-millisecond unfolding of ubiquitin. Proceedings of the National Academy of Sciences USA 102, 612-617.
In the Morse Lab
  1. Sickafoose, S. M., Smith, A. W., and Morse, M. D. (2002) Optical spectroscopy of tungsten carbide (WC). Journal of Chemical Physics 116, 993-1002.